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Success Stories


Publications
Evolution of antibiotic resistance is a world health crisis, fueled by new mutations

Drugs to slow mutagenesis could, as cotherapies, prolong the shelf-life of antibiotics, yet evolution-slowing drugs and drug targets have been underexplored and ineffective

Zhai, Y.; Pribis, J. P.; Dooling, S. W.; Garcia-Villada, L.; Minnick, P. J.; Xia, J.; Liu, J.; Mei, Q.; Fitzgerald, D. M.; Herman, C.; Hastings, P. J.; (8) Costa-Mattioli, M.; Rosenberg, S. M.
Science Advances 9 (25), eadg0188 (2023)

Here, we used a network-based strategy to identify drugs that block hubs of fluoroquinolone antibiotic-induced mutagenesis. We identify a U.S. Food and Drug Administration– and European Medicines Agency–approved drug, dequalinium chloride (DEQ), that inhibits activation of the Escherichia coli general stress response, which promotes ciprofloxacin-induced (stress-induced) mutagenic DNA break repair. We uncover the step in […]

Publications
CRISPR/Cas9-Based Screening of FDA-Approved Drugs for NRF2 Activation: A Novel Approach to Discover Therapeutics for Non-Alcoholic Fatty Liver Disease

With the rising prevalence of obesity, non-alcoholic fatty liver disease (NAFLD) now affects 20–25% of the global population

Li, J.; Arest, S.; Olszowy, B.; Gordon, J.; Barrero, C. A.; Perez-Leal, O.
Antioxidants 12 (7), 1363 (2023)

NAFLD, a progressive condition associated with oxidative stress, can result in cirrhosis and liver cancer in 10% and 3% of patients suffering NAFLD, respectively. Therapeutic options are currently limited, emphasizing the need for novel treatments. In this study, we examined the potential of activating the transcription factor NRF2, a crucial player in combating oxidative stress, […]

Publications
Oxiconazole Potentiates Gentamicin against Gentamicin-Resistant Staphylococcus Aureus In Vitro and In Vivo

Kaul, G.; Akhir, A.; Shukla, M.; Shafi, H.; Akunuri, R.; Pawar, G.; Ghouse, M.; Srinivas, N.; Chopra, S.
Microbiology Spectrum e05031-22 (2023)

Publications
A Multilevel Screening Pipeline in Zebrafish Identifies Therapeutic Drugs for GAN

Giant axonal neuropathy (GAN) is a fatal neurodegenerative disorder for which there is currently no treatment

Lescouzères, L.; Hassen‐Khodja, C.; Baudot, A.; Bordignon, B.; Bomont, P.
EMBO Molecular Medicine e16267 (2023)

Affecting the nervous system, GAN starts in infancy with motor deficits that rapidly evolve toward total loss of ambulation. Using the gan zebrafish model that reproduces the loss of motility as seen in patients, we conducted the first pharmacological screening for the GAN pathology. Here, we established a multilevel pipeline to identify small molecules restoring both the […]

Publications
Leveraging Genetic Diversity to Identify Small Molecules That Reverse Mouse Skeletal Muscle Insulin Resistance

Systems genetics has begun to tackle the complexity of insulin resistance by capitalising on computational advances to study high-diversity populations

Masson, S. W. C.; Madsen, S.; Cooke, K. C.; Potter, M.; Vegas, A. D.; Carroll, L.; Thillainadesan, S.; Cutler, H. B.; Walder, K. R.; Cooney, G. J.; Morahan, G.; Stöckli, J.; James, D. E.
Elife RP86961 (2023)

‘Diversity Outbred in Australia (DOz)’ is a population of genetically unique mice with profound metabolic heterogeneity. We leveraged this variance to explore skeletal muscle’s contribution to whole-body insulin action through metabolic phenotyping and skeletal muscle proteomics of 215 DOz mice. Linear modelling identified 553 proteins that associated with whole-body insulin sensitivity (Matsuda Index) including regulators […]

Publications
Cardiac Glycosides Restore Autophagy Flux in an iPSC-Derived Neuronal Model of WDR45 Deficiency

Beta-Propeller Protein-Associated Neurodegeneration (BPAN) is one of the commonest forms of Neurodegeneration with Brain Iron Accumulation, caused by mutations in the gene encoding the autophagy-related protein, WDR45.

Papandreou, A.; Singh, N.; Gianfrancesco, L.; Budinger, D.; Barwick, K.; Agrotis, A.; Luft, C.; Shao, Y.; Lenaerts, A.-S.; Gregory, A.; Jeong, S. Y.; Hogarth, P.; Hayflick, S.; Barral, S.; Kriston-Vizi, J.; Gissen, P.; Kurian, M. A.; Ketteler, R.
bioRxiv 556416 (2023)

The mechanisms linking autophagy, iron overload and neurodegeneration in BPAN are poorly understood and, as a result, there are currently no disease-modifying treatments for this progressive disorder. We have developed a patient-derived, induced pluripotent stem cell (iPSC)-based midbrain dopaminergic neuronal cell model of BPAN (3 patient, 2 age-matched controls and 2 isogenic control lines) which […]

Publications
Syrosingopine Enhances 20S Proteasome Activity and Degradation of α-Synuclein

Cellular proteins are degraded by the 26S proteasome in the ubiquitin-proteasome system in an ATP-dependent manner, whereas intrinsically disordered proteins (IDPs) are degraded by the 20S proteasome independent of ATP and ubiquitin.

Sadahiro, Y.; Nishimura, S.; Hitora, Y.; Tsukamoto, S.
J Nat Prod (2023)

The accumulation and aggregation of IDPs are considered to be the etiology of neurodegenerative diseases. Notably, the 20S proteasome has a cylindrical structure, and its gate on the α-ring is closed in the inactive form. The compounds that open the gate promote the degradation of IDPs and prevent their accumulation, and therefore, such compounds may […]

Publications
Screening for New Inhibitors of the Human Mitochondrial Pyruvate Carrier and Their Effects on Hepatic Glucose Production and Diabetes

The mitochondrial pyruvate carrier (MPC) is a protein complex composed of two subunits, MPC1 and MPC2

Herzig, S.; Li, L.; Jiménez-Sánchez, C.; Martinou, J.-C.; Maechler, P.
Biochim Biophys Acta Gen Subj 130492 (2023)

This carrier is at the interface between glycolysis and mitochondrial metabolism and plays an essential role in hepatic glucose production.

Publications
Simple Droplet Microfluidics Platform for Drug Screening on Cancer Spheroids

3D in vitro biological systems are progressively replacing 2D systems to increase the physiological relevance of cellular studies

Parent, C.; Melayil, K. R.; Zhou, Y.; Aubert, V.; Surdez, D.; Delattre, O.; Wilhelm, C.; Viovy, J.-L.
Lab Chip 5139–5150 (2023)

Microfluidics-based approaches can be powerful tools towards such biomimetic systems, but often require high-end complicated and expensive processes and equipment for microfabrication. Herein, a drug screening platform is proposed, minimizing technicality and manufacturing steps. It provides an alternate way of spheroid generation in droplets in tubes. Droplet microfluidics then elicit multiple droplets merging events at […]

Publications
Accumulation of Endogenous Free Radicals Is Required to Induce Titan-like Cell Formation in Cryptococcus Neoformans

Cryptococcus neoformans is an encapsulated yeast able to cause disease (mainly meningoencephalitis) among immunosuppressed patients, mostly HIV+

García-Barbazán, I.; Torres-Cano, A.; García-Rodas, R.; Sachse, M.; Luque, D.; Megías, D.; Zaragoza, O.
mBio e02549-23 (2023)

This yeast can form the so-called titan cells in vivo, which are cells of an abnormally larger size due to an increase in both the capsule and the cell body size (total size reaching between 50–70 μm). This phenomenon can be partially reproduced in vitro to obtain cells of an intermediate size (25–30 μm), which […]